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Diffprep: Segmentation Fault

Submitted by Rodolphe Nenert on Fri, 10/30/2020 - 10:44
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Trying to run Diffprep on a test subject with multi-shell DWI and I ended up with a segmentation fault after many hours of EPI correction. Script is running on research computing machine with 12 cores and 8gb of ram per core, so memory shouldnt be an issue. Any ideas? Here is my code:

DIFFPREP -i ${basedir}/DWI/${subject}_DWI_coreg_proc/${subject}_DWI_coreg.list \
-s ${basedir}/T1/${subject}_T2_ns_deob_acpc.nii \
--reg_settings registration_settings.dmc \
--will_be_drbuddied 0 \
--do_QC 0 \
--step 0 \
-c quadratic \
-e ITKBSPv4 \
--gibbs_ringing_correction on \
-d for_final \
--is_human_brain 1 \
--upsampling all \
--high_b 0 \
--center_of_mass \
--FoV 210 210 140 \
--keep_intermediate 0 \
--res 1.5 1.5 1.5